BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018C11LP1|AL427296
(908 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1212 1408 0.0
3x_Contig1489 278 2e-74
>3x_Contig1212
Length = 5727
Score = 1408 bits (710), Expect = 0.0
Identities = 722/725 (99%), Gaps = 1/725 (0%)
Strand = Plus / Minus
Query: 1 gatccctccgatttttaaaatgcgcatacatttcagattggaacttatgctttatgcctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 gatccctccgatttttaaaatgcgcatacatttcagattggaacttatgctttatgcctg 665
Query: 61 tgacatctttccctggaagatgttccattttttcaatatccacttctgttcccatcgctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 tgacatctttccctggaagatgttccattttttcaatatccacttctgttcccatcgctt 605
Query: 121 ggttatcaacggtatttgtactatgtttcgacacattgggcacatcattcggagaggaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 ggttatcaacggtatttgtactatgtttcgacacattgggcacatcattcggagaggaag 545
Query: 181 aagtttgtaatgggatgctcggaggacatcttgcagaagcataggagtcagcgggttgcc 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 544 aagtttgtaatgggatgctcggaggacatcttgcagaagcataggagttagcgggttgcc 485
Query: 241 gaaactgagcaacttgaggtttcgctggtgtaaggctgtctggtttacgatttttgttta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 gaaactgagcaacttgaggtttcgctggtgtaaggctgtctggtttacgatttttgttta 425
Query: 301 aatcttcacttccgtcatgactggcaatcggaagattagaatattcaaacaaatgtaaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 aatcttcacttccgtcatgactggcaatcggaagattagaatattcaaacaaatgtaaac 365
Query: 361 cgttattactattattattgtatccgtcttcaatgtcaacctcatctgggctatactcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 cgttattactattattattgtatccgtcttcaatgtcaacctcatctgggctatactcat 305
Query: 421 atctgttagatagccctatatccaaatcattcactgaaggtaggcctggcgtgccagcac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 atctgttagatagccctatatccaaatcattcactgaaggtaggcctggcgtgccagcac 245
Query: 481 gctgtcgaccgcccgctgctganaaattgtgtttttggctttcagtatcatcaaacaatt 540
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 244 gctgtcgaccgcccgctgctgataaattgtgtttttggctttcagtatcatcaaacaatt 185
Query: 541 cgagaaagaaaaagttacgtaaaaacgaaacgaatctcttgaaacaatattttattccaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 cgagaaagaaaaagttacgtaaaaacgaaacgaatctcttgaaacaatattttattccaa 125
Query: 601 tagcagaaccatttattacattcaaagcaatgttaagtgatggcttcctgttgaaaaaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 tagcagaaccatttattacattcaaagcaatgttaagtgatggcttcctgttgaaaaaat 65
Query: 661 taacatgattgtcttccgagtgttggaatcctttgatttctgatttgatctttcgacttt 720
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 t-acatgattgtcttccgagtgttggaatcctttgatttctgatttgatctttcgacttt 6
Query: 721 ctctg 725
|||||
Sbjct: 5 ctctg 1
>3x_Contig1489
Length = 10722
Score = 278 bits (140), Expect = 2e-74
Identities = 159/163 (97%), Gaps = 3/163 (1%)
Strand = Plus / Minus
Query: 743 gctgatgtatattgtgcaaatcgtcaagaagataaaatatcgaggcacccagctcaagac 802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10722 gctgatgtatattgtgcaaatcgtcaagaagataaaatatcgaggcacccagctcaagac 10663
Query: 803 tagtttataccatattggaactggtggtaagtaacaccatgcgcttaaaggtttataa-c 861
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 10662 tagtttataccatattggaactggtggtaagtaacaccatgcgcttaaaggtttataacc 10603
Query: 862 ccccatctttgcttggaat--caaattgtaattgttattgtct 902
||||||||||||||||||| |||||||||||||||||||||
Sbjct: 10602 ccccatctttgcttggaattcaaaattgtaattgttattgtct 10560
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7600
Number of Sequences: 1807
Number of extensions: 7600
Number of successful extensions: 77
Number of sequences better than 1.0e-20: 2
length of query: 908
length of database: 10,358,551
effective HSP length: 16
effective length of query: 892
effective length of database: 10,329,639
effective search space: 9214037988
effective search space used: 9214037988
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)